NLRC3

Protein-coding gene in the species Homo sapiens
NLRC3
Identifiers
AliasesNLRC3, CLR16.2, NOD3, NLR family, CARD domain containing 3, NLR family CARD domain containing 3
External IDsOMIM: 615648; MGI: 2444070; HomoloGene: 18720; GeneCards: NLRC3; OMA:NLRC3 - orthologs
Gene location (Human)
Chromosome 16 (human)
Chr.Chromosome 16 (human)[1]
Chromosome 16 (human)
Genomic location for NLRC3
Genomic location for NLRC3
Band16p13.3Start3,539,033 bp[1]
End3,577,403 bp[1]
Gene location (Mouse)
Chromosome 16 (mouse)
Chr.Chromosome 16 (mouse)[2]
Chromosome 16 (mouse)
Genomic location for NLRC3
Genomic location for NLRC3
Band16|16 A1Start3,762,871 bp[2]
End3,794,496 bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • thymus

  • blood

  • lymph node

  • endothelial cell

  • spleen

  • appendix

  • thymus

  • amniotic fluid

  • pancreatic epithelial cell

  • superficial temporal artery
Top expressed in
  • blood

  • thymus

  • soleus muscle

  • spleen

  • submandibular gland

  • subcutaneous adipose tissue

  • morula

  • aortic valve

  • ciliary body

  • ascending aorta
More reference expression data
BioGPS
n/a
Gene ontology
Molecular function
  • nucleotide binding
  • ATP binding
  • protein binding
  • phosphatidylinositol 3-kinase regulatory subunit binding
  • molecular function
Cellular component
  • cytoplasm
  • microtubule organizing center
  • cytosol
  • perinuclear region of cytoplasm
Biological process
  • negative regulation of interleukin-6 production
  • negative regulation of tumor necrosis factor production
  • I-kappaB kinase/NF-kappaB signaling
  • negative regulation of NF-kappaB transcription factor activity
  • T cell activation
  • negative regulation of I-kappaB kinase/NF-kappaB signaling
  • negative regulation of phosphatidylinositol 3-kinase signaling
  • negative regulation of interferon-alpha production
  • negative regulation of interferon-beta production
  • negative regulation of innate immune response
  • negative regulation of fibroblast proliferation
  • negative regulation of epithelial cell proliferation
  • negative regulation of inflammatory response
  • negative regulation of cytokine production involved in inflammatory response
  • negative regulation of NLRP3 inflammasome complex assembly
  • negative regulation of NIK/NF-kappaB signaling
  • intracellular signal transduction
Sources:Amigo / QuickGO
Orthologs
SpeciesHumanMouse
Entrez

197358

268857

Ensembl

ENSG00000167984

ENSMUSG00000049871

UniProt

Q7RTR2

Q5DU56

RefSeq (mRNA)

NM_178844

NM_001081280
NM_175547

RefSeq (protein)

NP_849172

NP_001074749
NP_780756

Location (UCSC)Chr 16: 3.54 – 3.58 MbChr 16: 3.76 – 3.79 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

NLRC3, short for NOD-like receptor family CARD domain containing 3, is an intracellular protein that plays a role in the immune system.[5] It was previously known as nucleotide-binding oligomerization domain, leucine rich repeat and CARD domain containing 3 (NOD3) and CLR16.2. NLRC3 inhibits the activity of T cells.[6] NLRC3 also inhibits the mTOR signalling pathway to block cellular proliferation.[7]

References

  1. ^ a b c GRCh38: Ensembl release 89: ENSG00000167984 – Ensembl, May 2017
  2. ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000049871 – Ensembl, May 2017
  3. ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ Ting JP, Lovering RC, Alnemri ES, et al. (March 2008). "The NLR gene family: a standard nomenclature". Immunity. 28 (3): 285–7. doi:10.1016/j.immuni.2008.02.005. PMC 2630772. PMID 18341998.
  6. ^ Conti BJ, Davis BK, Zhang J, O'connor W, Williams KL, Ting JP (May 2005). "CATERPILLER 16.2 (CLR16.2), a novel NBD/LRR family member that negatively regulates T cell function". J. Biol. Chem. 280 (18): 18375–85. doi:10.1074/jbc.M413169200. PMID 15705585.
  7. ^ Karki R, Man SM, Malireddi RK, Kesavardhana S, Zhu Q, Burton AR, Sharma BR, Qi X, Pelletier S, Vogel P, Rosenstiel P (December 2016). "NLRC3 is an inhibitory sensor of PI3K–mTOR pathways in cancer". Nature. 540 (7634): 583–587. Bibcode:2016Natur.540..583K. doi:10.1038/nature20597. ISSN 1476-4687. PMC 5468516. PMID 27951586.
  • v
  • t
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CARD domain containing
Pyrin domain containingApoptosis inhibitory protein
  • NAIP
Family member X1


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